Program windows won't come to foreground when selected in Windows 8.1

I'm having a problem where I select a window but it won't come to the foreground. This mostly happens with Chrome, but I've also had it happen with folder windows and other programs. Example.

I can fix it for a short while by restarting my computer. At first I thought it was a Chrome problem, so I uninstalled and reinstalled it. However, I'm now noticing it between multiple programs.

Anyone have an idea of what's going on? I was able to find some information about this happening on Windows 7. I tried all of those suggestions I could find (most involved editing a registery value. No luck.

Answer

Are you using Synergy?

Update for Microsoft Windows (KB3031432) seems to be the culprit in combination with Synergy...

http://synergy.askbot.com/question/838/windows-81-window-focus-problem/

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